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Motionbuilder beginner help

Szani
polycounter lvl 2
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Szani polycounter lvl 2
Hi! 
I am very new in motionbuilder and can't find complex tutorial that would help me solve problems. I hope I can explain what i am doing and you will show me where is mistake:
First issue - I have task to retarget animation from one fbx file to other. But I don't understand something. When I open file with model it has already characterized skeleton but what is more weird that fbx mocap file looks same (has ik targets etc I can manipulate it) when I merge it into scene. So when I plot them they become one skeleton with 2 pair of legs and 2 pair of arms etc. When I want to import fbx mocap file as imported motion data I get skeleton that look like typical bvh and banch of dots but when I plot them then mocap skeleton is active and original model skeleton become grey and I can't do anything to it.

Other thing is that this mocap fbx file has tons of objects and when I delete one few more appear in it's place.

And I can't use root even if it apears in control panel....

I am so noob but I can't find complex tutorial I don't know what to do. Thank you.
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